2004ApJ...613...23M

We quantify and discuss the footprints of neutral hydrogen in the intergalactic medium (IGM) on the spectra of high-redshift (z∼6) sources, using mock spectra generated from hydrodynamical simulations of the IGM. We show that it should be possible to extract relevant parameters, including the mean neutral fraction in the IGM and the radius of the local cosmological Strömgren region, from the flux distribution in the observed spectra of distant sources. We focus on quasars, but a similar analysis is applicable to galaxies and gamma-ray burst (GRB) afterglows. We explicitly include uncertainties in the spectral shape of the assumed source template near the Lyα line. Our results suggest that a mean neutral hydrogen fraction, x_H, of unity can be statistically distinguished from x_H~10^–2 by combining the spectra of tens of bright (M~-27) quasars. Alternatively, the same distinction can be achieved using the spectra of several hundred sources that are ∼100 times fainter. Furthermore, if the radius of the Strömgren sphere can be independently constrained to within ∼10%, this distinction can be achieved using a single source. The information derived from such spectra will help in settling the current debate as to what extent the universe was reionized at redshifts near z∼6.